Protein ZmYAB11
ZmYAB11 is a protein in the C2C2-YABBY family.
Information
TF Name: ZmYAB11
Species: Maize
TF Family: C2C2-YABBY
Gene Name(Synonym): YAB11
Uniprot ID: B4FRP9
Subgenome: 1

Protein ZmYAB11

ZmYAB11 is a protein in the C2C2-YABBY family.

Overview of domains present in v5 transcripts
PF04690
Zm00001eb032110_T002
Zm00001eb032110_T001
Zm00001eb032110_T003
Zm00001eb032110_T004

Protein-DNA Interactions

Meme Logos for Maize v4 Gene IDs


Gene IDTypeMEME LogoSequenceFIMOPosition
Zm00001d031109DAPseq no logo sequence fimo position
Zm00001d031109DAPseq no logo sequence fimo position
Zm00001d031109ChIPseq no logo sequence fimo position
Zm00001d031109PChIPseq no logo sequence fimo position

Interactions where ZmYAB11 is the regulator


There are no protein-dna interactions that fit this criteria.

Interactions where ZmYAB11 is the target  
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There are 69 protein-dna interactions that fit this criteria. download excel sheet

Zm00001eb032110_T002 from maize genome v5

Amino Acid Sequence
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MSSAQIAPADHVCYVHCNFCNTVLAVSVPGNSMLSMVTVRCGHCTNLLSVNLRALMHSVPEQDQLQQQENIRVHGTLREH
HQCGGGHHLELGSSSSSRFRLPMMMSYAPQNEHLLQEQTLNNARPAPEKRQRVPSAYNRFIKEEIRRIKANNPDISHREA
FSTAAKNWAHYPNIHFGLNSGREGGKNKLVDEAVAAVAVAPKKIQGFY

MSSAQIAPADHVCYVHCNFCNTVLAVSVPGNSMLSMVTVRCGHCTNLLSVNLRALMHSVPEQDQLQQQENIRVHGTLREH
HQCGGGHHLELGSSSSSRFRLPMMMSYAPQNEHLLQEQTLNNARPAPEKRQRVPSAYNRFIKEEIRRIKANNPDISHREA
FSTAAKNWAHYPNIHFGLNSGREGGKNKLVDEAVAAVAVAPKKIQGFY

MSSAQIAPADHVCYVHCNFCNTVLAVSVPGNSMLSMVTVRCGHCTNLLSVNLRALMHSVPEQDQLQQQENIRVHGTLREH
HQCGGGHHLELGSSSSSRFRLPMMMSYAPQNEHLLQEQTLNNARPAPEKRQRVPSAYNRFIKEEIRRIKANNPDISHREA
FSTAAKNWAHYPNIHFGLNSGREGGKNKLVDEAVAAVAVAPKKIQGFY

MSSAQIAPADHVCYVHCNFCNTVLAVSVPGNSMLSMVTVRCGHCTNLLSVNLRALMHSVPEQDQLQQQENIRVHGTLREH
HQCGGGHHLELGSSSSSRFRLPMMMSYAPQNEHLLQEQTLNNARPAPEKRQRVPSAYNRFIKEEIRRIKANNPDISHREA
FSTAAKNWAHYPNIHFGLNSGREGGKNKLVDEAVAAVAVAPKKIQGFY

MSSAQIAPADHVCYVHCNFCNTVLAVSVPGNSMLSMVTVRCGHCTNLLSVNLRALMHSVPEQDQLQQQENIRVHGTLREH
HQCGGGHHLELGSSSSSRFRLPMMMSYAPQNEHLLQEQTLNNARPAPEKRQRVPSAYNRFIKEEIRRIKANNPDISHREA
FSTAAKNWAHYPNIHFGLNSGREGGKNKLVDEAVAAVAVAPKKIQGFY

Secondary Structure Color Code
BEND region with high backbone curvature without specific hydrogen bonding
HELX_LH_PP_P left-handed polyproline helix
HELX_RH_3T_P right-handed 3-10 helix
HELX_RH_AL_P right-handed alpha helix
HELX_RH_PI_P right-handed pi helix
STRN beta strand
TURN_TY1_P type I turn
UNDETERMINED no data available
Domains Present
PF04690
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Nucleotide Sequence
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AGCAAATAAAGGCACTGCTGCACTC...

GRMZM2G141955_T01 from maize genome v3

Amino Acid Sequence
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MSSAQIAPADHVCYVHCNFCNTVLAVSVPGNSMLSMVTVRCGHCTNLLSVNLRALMHSVPEQDQLQENIRVHGTLREHHQ
CGGGHHLELGSSSSSRFRLPMMMSYAPQNEHLLQEQTLNNARPAPEKRQRVPSAYNRFIKEEIRRIKANNPDISHREAFS
TAAKNWAHYPNIHFGLNSGREGGKNKLVDEAVAAVAVAPKKIQGFY

Nucleotide Sequence
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CAATCATGGGGCATTTCCCCTCTCT...

GRMZM2G141955_T02 from maize genome v3

Amino Acid Sequence
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MRSDELTAARLRTHAPSSPRSYIGLFSFPRFVFYLRSSKLV

Nucleotide Sequence
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CAATCATGGGGCATTTCCCCTCTCT...

GRMZM2G141955_T03 from maize genome v3


Related TFome: pUT3388

Amino Acid Sequence
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MSSAQIAPADHVCYVHCNFCNTVLAVSVPGNSMLSMVTVRCGHCTNLLSVNLRALMHSVPEQDQLQQENIRVHGTLREHH
QCGGGHHLELGSSSSSRFRLPMMMSYAPQNEHLLQEQTLNNARPAPEKRQRVPSAYNRFIKEEIRRIKANNPDISHREAF
STAAKNWAHYPNIHFGLNSGREGGKNKLVDEAVAAVAVAPKKIQGFY

Nucleotide Sequence
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CCTCTCTCCAGCACATTGCTGCTTC...

GRMZM2G141955_T04 from maize genome v3

Amino Acid Sequence
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MSSAQIAPADHVCYVHCNFCNTVLAVSVPGNSMLSMVTVRCGHCTNLLSVNLRALMHSVPEQDQLQQENIRVHGTLREHH
QCGGGHHLELGSSSSSRFRLPMMMSYAPQNEHLLQEQTLNNARPAPEKRQRVPSAYNRFIK

Nucleotide Sequence
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CCTCTCTCCAGCACATTGCTGCTTC...

GRMZM2G141955_T05 from maize genome v3

Amino Acid Sequence
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MLSMVTVRCGHCTNLLSVNLRALMHSVPEQDQLQQENIRVHGTLREHHQCGGGHHLELGSSSSSRFRLPMMMSYAPQNEH
LLQEQTLNNARPAPEKRQRVPSAYNRFIKEEIRRIKANNPDISHREAFSTAAKNWAHYPNIHFGLNSGREGGKNKLVDEA
VAAVAVAPKKIQGFY

Nucleotide Sequence
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AAAAGTAGGGCTAGAAAAGCTATAT...

Zm00001d031109_T001 from maize genome v4

Amino Acid Sequence
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MLSMVTVRCGHCTNLLSVNLRALMHSVPEQDQLQQENIRVHGTLREHHQCGGGHHLELGSSSSSRFRLPMMMSYAPQNEH
LLQEQTLNNARPAPEKRQRVPSAYQQLTFGSFYQIIKRCVRVCREEIRRIKANNPDISHREAFSTAAKNWAHYPNIHFGL
NSGREGGKNKLVDEAVAAVAVAPKKIQGFY

Nucleotide Sequence
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ACCCACTCATTGTAGCAATCATGGG...

Zm00001d031109_T002 from maize genome v4

Amino Acid Sequence
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MSSAQIAPADHVCYVHCNFCNTVLAVSVPGNSMLSMVTVRCGHCTNLLSVNLRALMHSVPEQDQLQQQENIRVHGTLREH
HQCGGGHHLELGSSSSSRFRLPMMMSYAPQNEHLLQEQTLNNARHQQLTFGSFYQIIKRCVRVCREEIRRIKANNPDISH
REAFSTAAKNWAHYPNIHFGLNSGREGGKNKLVDEAVAAVAVAPKKIQGFY

Nucleotide Sequence
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AGCAAATAAAGGCACTGCTGCACTC...

Zm00001d031109_T003 from maize genome v4

Amino Acid Sequence
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MSSAQIAPADHVCYVHCNFCNTVLAVSVPGNSMLSMVTVRCGHCTNLLSVNLRALMHSVPEQDQLQQQENIRVHGTLREH
HQCGGGHHLELGSSSSSRFRLPMMMSYAPQNEHLLQEQTLNNARPAPEKRQRVPSAYNRFIKEEIRRIKANNPDISHREA
FSTAAKNWAHYPNIHFGLNSGREGGKNKLVDEAVAAVAVAPKKIQGFY

Nucleotide Sequence
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AGCAAATAAAGGCACTGCTGCACTC...

Zm00001d031109_T004 from maize genome v4

Amino Acid Sequence
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MLSMVTVRCGHCTNLLSVNLRALMHSVPEQDQLQQENIRVHGTLREHHQCGGGHHLELGSSSSSRFRLPMMMSYAPQNEH
LLQEQTLNNARPAPEKRQRVPSAYNRFIKEEIRRIKANNPDISHREAFSTAAKNWAHYPNIHFGLNSGREGGKNKLVDEA
VAAVAVAPKKIQGFY

Nucleotide Sequence
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ACCGTCTCTCAGTTCTCACTCTAGC...

Zm00001d031109_T005 from maize genome v4

Amino Acid Sequence
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MLSMVTVRCGHCTNLLSVNLRALMHSVPEQDQLQQQENIRVHGTLREHHQCGGGHHLELGSSSSSRFRLPMMMSYAPQNE
HLLQEQTLNNARPAPEKRQRVPSAYNRFIKEEIRRIKANNPDISHREAFSTAAKNWAHYPNIHFGLNSGREGGKNKLVDE
AVAAVAVAPKKIQGFY

Nucleotide Sequence
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GTCTCTCAGTTCTCACTCTAGCGCT...

Zm00001d031109_T010 from maize genome v4

Amino Acid Sequence
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MSSAQIAPADHVCYVHCNFCNTVLAVSVPGNSMLSMVTVRCGHCTNLLSVNLRALMHSVPEQDQLQQENIRVHGTLREHH
QCGGGHHLELGSSSSSRFRLPMMMSYAPQNEHLLQEQTLNNARPAPEKRQRVPSAYNRFIKEEIRRIKANNPDISHREAF
STAAKNWAHYPNIHFGLNSGREGGKNKLVDEAVAAVAVAPKKIQGFY

Nucleotide Sequence
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AGCTTGTTGCTGCCTTTCTAGCTGA...

Zm00001d031109_T012 from maize genome v4

Amino Acid Sequence
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MLSMVTVRCGHCTNLLSVNLRALMHSVPEQDQLQQENIRVHGTLREHHQCGGGHHLELGSSSSSRFRLPMMMSYAPQNEH
LLQEQTLNNARRKFRFLFCLLYIITCNHACISRCVRFDF

Nucleotide Sequence
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TGGTACCTAGCTAGCTGCTACTTTC...

Zm00001d031109_T013 from maize genome v4

Amino Acid Sequence
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MHKSLPCLFPTCYDVVQVTDQSGRVPPALLRFGTFCLEKTISLHSAKGLLF

Nucleotide Sequence
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ATATGTGATGAATTCATGTATAGGA...

Zm00001eb032110_T001 from maize genome v5

Amino Acid Sequence
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MSSAQIAPADHVCYVHCNFCNTVLAVSVPGNSMLSMVTVRCGHCTNLLSVNLRALMHSVPEQDQLQENIRVHGTLREHHQ
CGGGHHLELGSSSSSRFRLPMMMSYAPQNEHLLQEQTLNNARPAPEKRQRVPSAYNRFIKEEIRRIKANNPDISHREAFS
TAAKNWAHYPNIHFGLNSGREGGKNKLVDEAVAAVAVAPKKIQGFY

Nucleotide Sequence
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GTAGCAATCATGGGGCATTTCCCCT...

Zm00001eb032110_T003 from maize genome v5

Amino Acid Sequence
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MSSAQIAPADHVCYVHCNFCNTVLAVSVPGNSMLSMVTVRCGHCTNLLSVNLRALMHSVPEQDQLQQENIRVHGTLREHH
QCGGGHHLELGSSSSSRFRLPMMMSYAPQNEHLLQEQTLNNARPAPEKRQRVPSAYNRFIKEEIRRIKANNPDISHREAF
STAAKNWAHYPNIHFGLNSGREGGKNKLVDEAVAAVAVAPKKIQGFY

Nucleotide Sequence
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AGCAAATAAAGGCACTGCTGCACTC...

Zm00001eb032110_T004 from maize genome v5

Amino Acid Sequence
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MLSMVTVRCGHCTNLLSVNLRALMHSVPEQDQLQQENIRVHGTLREHHQCGGGHHLELGSSSSSRFRLPMMMSYAPQNEH
LLQEQTLNNARPAPEKRQRVPSAYNRFIKEEIRRIKANNPDISHREAFSTAAKNWAHYPNIHFGLNSGREGGKNKLVDEA
VAAVAVAPKKIQGFY

Nucleotide Sequence
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AAAAGTAGGGCTAGAAAAGCTATAT...


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